|
Family
|
|---|
|
Dataset
|
TransClust (
T
)
|
HiFix (
s,c
)
|
MCL (
I
)
|
SCPS (
c
)
|
|
A-10
|
0.741 (15)
|
0.652 (0.10,0.7)
|
0.693 (26)
|
-
|
|
A-20
|
0.749 (15)
|
0.685 (0.15,0.7)
|
0.703 (24)
|
-
|
|
A-30
|
0.750 (15)
|
0.695 (0.15,0.7)
|
0.707 (24)
|
-
|
|
A-50
|
0.751 (20)
|
0.702 (0.20,0.7)
|
0.709 (18)
|
-
|
|
A-70
|
0.753 (20)
|
0.713 (0.20,0.6)
|
0.712 (17)
|
-
|
|
A-90
|
0.767 (15)
|
0.717 (0.20,0.6)
|
0.715 (17)
|
-
|
|
A-95
|
0.769 (15)
|
0.725 (0.20,0.7)
|
0.743 (17)
|
-
|
|
GOLD
|
0.959 (50)
|
0.921 (0.30,0.6)
|
0.925 (15)
|
-
|
|
Super-family
|
|
A-10
|
0.722 (1)
|
0.699 (0.10,0.6)
|
0.752 (59)
|
0.750 (648)
|
|
A-20
|
0.783 (5)
|
0.701 (0.10,0.7)
|
0.754 (59)
|
0.759 (753)
|
|
A-30
|
0.809 (5)
|
0.705 (0.10,0.7)
|
0.778 (59)
|
0.777 (955)
|
|
A-50
|
0.827 (5)
|
0.710 (0.15,0.7)
|
0.781 (58)
|
0.789 (1188)
|
|
A-70
|
0.833 (5)
|
0.711 (0.15,0.7)
|
0.788 (60)
|
0.792 (1279)
|
|
A-90
|
0.835 (5)
|
0.715 (0.15,0.7)
|
0.805 (59)
|
0.805 (1345)
|
|
A-95
|
0.837 (5)
|
0.716 (0.15,0.7)
|
0.807 (60)
|
0.805 (1401)
|
|
GOLD
|
0.999 (1)
|
0.974 (0.05,0.5)
|
1.000 (60)
|
1.000 (6)
|
- The optimized set of parameters determined for each clustering algorithm are shown in parenthesis, see Section ‘Parameter optimization’. Best values are shown in bold.
