Figure 7
From: MARZ: an algorithm to combinatorially analyze gapped n-mer models of transcription factor binding
Comparison of the performance of all gapped n -mer matrices to the traditional m matrix for HB. (A and C) Chi-square values with significance color-coded: Green (p<0.01), Aqua (p<0.05). See Materials and Methods for a description of the Chi-square analysis. (B and D) Pearson correlation distance from mononucleotide matrix. See Materials and Methods for a description of the calculation. Panels A and B are obtained using a threshold of 0.0, and C and D using a threshold of 1.0.