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Figure 1 | BMC Bioinformatics

Figure 1

From: MeSH ORA framework: R/Bioconductor packages to support MeSH over-representation analysis

Figure 1

MeSH ORA framework and dependency of the packages. Our MeSH framework consists of six types of R packages: the MeSH.db, MeSH.AOR.db-type packages, MeSH.PCR.db, org.MeSH.XXX.db, MeSHDbi, and meshr. MeSHDbi defines the class used in the MeSH.db, MeSH.AOR.db, MeSH.PCR.db, and org.MeSH.XXX.db-type packages and then unifies the behavior of these packages. meshr imports the data from MeSH.db and org.MeSH.XXX.db and performs ORA.

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