Skip to main content

Table 4 GO and MeSH annotations for antibiotic registance Pseudomonas aeruginosa : comparison of NCBI gene descriptions, GO, and MeSH

From: MeSH ORA framework: R/Bioconductor packages to support MeSH over-representation analysis

Locus

MeSH

 

H, p=0.040

J, p=0.021

L, p=1.5E-7

M, p=0.36

N, p=0.061

PA3303

-

-

-

-

-

PA0392

-

-

-

-

-

PA4077

-

-

-

-

-

PA5199

Systems Biology (+1)

-

Computer Simulation (+3)

-

Temperature (+2)

PA5366

Photochemistry

-

Phylogeny (+3)

-

-

PA5200

Proteomics (+3)

Polystyrene (+1)

Base Sequence (+5)

-

Biomass (+3)

PA0016

Genetics, Microbial (+1)

Membranes, Artificial

Amino Acid Sequence (+3)

-

Sensitivity and Specificity (+1)

PA4942

-

-

Databases, Protein (+4)

-

Ultraviolet Rays (+2)

PA3014

-

Polyesters

Software (+4)

-

Temperature

PA4398

-

-

-

-

-

PA5528

-

-

-

-

-

PA1805

Genomics

-

Base Sequence (+1)

-

Hot Temperature

PA3016

-

-

-

-

-

PA4223

-

-

-

-

-

PA4960

Research

-

Computers (+4)

-

Cluster Analysis (+1)

PA0374

Computational Biology

-

Phylogeny (+4)

-

Temperature

PA3013

-

-

Software (+4)

-

-

PA5471

-

-

-

-

-

PA0502

-

-

-

-

-

PA3194

Molecular Biology (+1)

-

Molecular Sequence Data (+2)

-

Biomass

PA1775

-

-

-

-

-

PA0427

Crystallography (+2)

Liposomes (+2)

Base Sequence (+2)

Infant, Newborn

Environment

PA4222

-

-

-

-

-

PA5369

-

-

-

-

-

PA2018

-

-

Molecular Sequence Data

-

-

PA5285

-

-

-

-

-

PA2604

Statistics as Topic

-

Terminology as Topic (+4)

-

Statistics as Topic

PA2019

-

-

-

-

-

PA4050

-

-

-

-

-