Table 1 Comparison to Illumina’s bcl2fastq
From: TagDust2: a generic method to extract reads from sequencing data
| Â | Sample | bcl2fastq | TagDust2 | Difference (TagDust2 - |
|---|---|---|---|---|
| Â | Â | Â | Â | bcl2fastq) |
Number of | AR005 | 1.472.734 | 1.508.848 | 36.114 |
extracted reads | Â | Â | Â | Â |
| Â | AR008 | 1.518.208 | 1.543.918 | 25.710 |
| Â | PhiX | 49.104 | 51.488 | 2.384 |
Number of | AR005 | 1.435.567 | 1.464.037 | 28.470 |
aligned reads | Â | Â | Â | Â |
| Â | AR008 | 1.479.158 | 1.498.524 | 19.366 |
| Â | PhiX | 46.369 | 48.296 | 1.927 |