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Table 3 Summary of hits to selected compounds from a chemically defined growth medium determined from a query of monoisotopic masses using the Metabolome Searcher

From: Metabolome searcher: a high throughput tool for metabolite identification and metabolic pathway mapping directly from mass spectrometry and using genome restriction

Compound

Detected by mass match

Number of additional hits*

Number of non-isomeric additional hits*

Tyrosine

Yes

29

25

Pyridoxamine

Yes

0

0

Lysine

Yes

4

1

Thymidine

Yes

0

0

Pyridoxal

Yes

8

5

Glycine

Yes

1

0

Dihydrouracil

Yes

4

0

Arginine

Yes

2

1

Threonine

Yes

7

0

Alanine

Yes

5

0

Serine

Yes

1

0

Asparagine

Yes

5

0

Histidine

Yes

3

1

Tryptophan

Yes

2

1

Aspartate

Yes

2

0

Glutamate

Yes

6

0

Guanosine

Yes

0

0

  1. *Additional hits include all individual compounds that match the query using the provided query settings; non-isomeric hits only include compounds that do not share the same empirical formula.