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Figure 2 | BMC Bioinformatics

Figure 2

From: Measuring semantic similarities by combining gene ontology annotations and gene co-function networks

Figure 2

Performance comparison on Log-transformed Fold Change (LFC) scores of similarity measures on GO’s biological process terms in yeast, Arabidopsis, and human. Distributions of Log-transformed Fold Change (LFC) scores of similarity measures on GO’s biological process terms in yeast (A), Arabidopsis (B), and human (C). The top and bottom of the boxes represent 75th and 25th percentiles, dark lines are the median, top and bottom whiskers represent greatest and lowest values except outliers. Circles represent outliers that are larger than the sum of 75th and 1.5 interquartile range. Number of reactions for which NETSIM, Wang, Yu, and Schlicker measures performed the best for yeast (D), Arabidopsis (E), and human (F).

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