From: histoneHMM: Differential analysis of histone modifications with broad genomic footprints
Region | Chrom | Start | End | qPCR validation | deletion | histoneHMM | Diffreps | Chipdiff | Rseg |
---|---|---|---|---|---|---|---|---|---|
1 | chr5 | 108,178,675 | 108,178,725 | diff | Y | Y | Y | FN | Y |
2 | chr20 | 3,578,026 | 3,578,076 | diff | N | Y | Y | Y | Y |
3 | chr20 | 4,476,835 | 4,476,885 | non-diff | N | FP | FP | FP | Y |
4 | chr20 | 4,677,234 | 4,677,284 | diff | Y | Y | Y | Y | Y |
5 | chr15 | 29,555,868 | 29,555,918 | diff | N | Y | Y | FN | Y |
6 | chr11 | 76,487,730 | 76,487,780 | non-diff | N | FP | FP | FP | FP |
7 | chr15 | 19,393,444 | 19,393,494 | diff | N | Y | Y | Y | FN |
8 | chr1 | 2,026,376 | 2,026,436 | diff | Y | Y | Y | FN | FN |
9 | chr1 | 2,123,750 | 2,123,800 | diff | N | Y | Y | FN | FN |
10 | chr13 | 86,915,949 | 86,916,000 | diff | N | Y | Y | Y | Y |
11 | chr15 | 30,003,020 | 30,003,070 | diff | Y | Y | Y | Y | Y |