From: Impact of missing data imputation methods on gene expression clustering and classification
Datasets | Mean | Median | KNN | BPCA | LLS | |
---|---|---|---|---|---|---|
k-medoids | alizadeh-2000-v1 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 |
alizadeh-2000-v2 | 0.89 | 0.89 | 0.84 | 0.89 | 0.84 | |
alizadeh-2000-v3 | 0.65 | 0.65 | 0.65 | 0.65 | 0.65 | |
bredel-2005 | 0.41 | 0.41 | 0.41 | 0.41 | 0.41 | |
chen-2002 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | |
garber-2001 | 0.55 | 0.51 | 0.54 | 0.49 | 0.54 | |
lapointe-2004-v1 | 0.42 | 0.47 | 0.47 | 0.44 | 0.47 | |
lapointe-2004-v2 | 0.17 | 0.17 | 0.15 | 0.17 | 0.15 | |
liang-2005 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | |
risinger-2003 | 0.45 | 0.45 | 0.45 | 0.47 | 0.45 | |
tomlins-2006 | 0.39 | 0.39 | 0.4 | 0.39 | 0.4 | |
tomlins-2006 | 0.51 | 0.51 | 0.51 | 0.51 | 0.51 | |
HC-CL | alizadeh-2000-v1 | 0.04 | 0.04 | 0.13 | 0.13 | 0.13 |
alizadeh-2000-v2 | 0.54 | 0.54 | 0.52 | 0.40 | 0.52 | |
alizadeh-2000-v3 | 0.38 | 0.38 | 0.39 | 0.47 | 0.39 | |
bredel-2005 | -0.03 | 0.07 | 0.03 | 0.07 | 0.03 | |
chen-2002 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | |
garber-2001 | 0.55 | 0.55 | 0.55 | 0.55 | 0.55 | |
lapointe-2004-v1 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | |
lapointe-2004-v2 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | |
liang-2005 | 0.12 | 0.12 | 0.12 | 0.12 | 0.12 | |
risinger-2003 | 0.09 | 0.09 | 0.10 | 0.09 | 0.10 | |
tomlins-2006 | 0.46 | 0.46 | 0.39 | 0.43 | 0.39 | |
tomlins-2006 | 0.39 | 0.39 | 0.39 | 0.39 | 0.39 | |
HC-AL | alizadeh-2000-v1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
alizadeh-2000-v2 | 0.79 | 0.79 | 0.79 | 0.79 | 0.79 | |
alizadeh-2000-v3 | 0.40 | 0.40 | 0.44 | 0.44 | 0.44 | |
bredel-2005 | -0.07 | -0.08 | -0.07 | -0.05 | -0.07 | |
chen-2002 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | |
garber-2001 | 0.00 | 0.00 | 0.00 | 0.02 | 0.00 | |
lapointe-2004-v1 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | |
lapointe-2004-v2 | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | |
liang-2005 | 0.12 | 0.12 | 0.12 | 0.12 | 0.12 | |
risinger-2003 | 0.14 | 0.14 | 0.12 | 0.14 | 0.12 | |
tomlins-2006 | 0.44 | 0.44 | 0.41 | 0.41 | 0.41 | |
tomlins-2006 | 0.56 | 0.56 | 0.56 | 0.56 | 0.56 |