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Table 1 Results from assembling 1,534 protein coding genes using aTRAM, a reference-based and a de novo approach

From: aTRAM - automated target restricted assembly method: a fast method for assembling loci across divergent taxa from next-generation sequencing data

  Proportion (mean, range) P-Distance Reciprocal best-blast
(mean, std dev) (total 1,534)
aTRAM 0.99 (1-0.20) 0.093 (0.044) 1,530 (99.7%)
Reference 0.93 (1-0.19) 0.077 (0.022) N/A
de novo 0.92 (1-0.16) 0.095 (0.052) 1,512 (98.92%)
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BMC Bioinformatics

ISSN: 1471-2105

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