BMC Bioinformatics

Table 1 Results from assembling 1,534 protein coding genes using aTRAM, a reference-based and a de novo approach

From: aTRAM - automated target restricted assembly method: a fast method for assembling loci across divergent taxa from next-generation sequencing data

	Proportion (mean, range)	P-Distance	Reciprocal best-blast
	Proportion (mean, range)	(mean, std dev)	(total 1,534)
aTRAM	0.99 (1-0.20)	0.093 (0.044)	1,530 (99.7%)
Reference	0.93 (1-0.19)	0.077 (0.022)	N/A
de novo	0.92 (1-0.16)	0.095 (0.052)	1,512 (98.92%)

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