Skip to main content

Table 5 Average rank scores for the different methods on BAliBASE datasets, using the accuracy metrics described in the main text and in Table 2

From: Efficient representation of uncertainty in multiple sequence alignments using directed acyclic graphs

 

Ref 1a (<25 % )

Ref 1b (20−40 % )

 

α C

\(\phantom {\dot {i}\!}\alpha _{C^{+}}\)

AMA

α C

\(\phantom {\dot {i}\!}\alpha _{C^{+}}\)

AMA

MinRisk (C), g=0

0.94

0.77

0.88

0.88

0.85

0.82

MinRisk (C), g=0.5

0.90

0.41

0.66

0.92

0.81

0.90

MinRisk (C), g=1

0.88

0.41

0.63

0.94

0.83

0.93

MinRisk (C +), g=0

0.67

0.92

0.77

0.71

0.87

0.66

MinRisk (C +), g=0.5

0.86

0.86

0.88

0.85

0.91

0.89

MinRisk (C +), g=1

0.88

0.64

0.78

0.90

0.88

0.93

MergeAlign

0.91

0.59

0.74

0.80

0.75

0.84

S-Coffee

0.45

0.14

0.26

0.52

0.32

0.52

  1. Highest values for each column shown in bold.