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Table 5 Average rank scores for the different methods on BAliBASE datasets, using the accuracy metrics described in the main text and in Table 2

From: Efficient representation of uncertainty in multiple sequence alignments using directed acyclic graphs

  Ref 1a (<25 % ) Ref 1b (20−40 % )
  α C \(\phantom {\dot {i}\!}\alpha _{C^{+}}\) AMA α C \(\phantom {\dot {i}\!}\alpha _{C^{+}}\) AMA
MinRisk (C), g=0 0.94 0.77 0.88 0.88 0.85 0.82
MinRisk (C), g=0.5 0.90 0.41 0.66 0.92 0.81 0.90
MinRisk (C), g=1 0.88 0.41 0.63 0.94 0.83 0.93
MinRisk (C +), g=0 0.67 0.92 0.77 0.71 0.87 0.66
MinRisk (C +), g=0.5 0.86 0.86 0.88 0.85 0.91 0.89
MinRisk (C +), g=1 0.88 0.64 0.78 0.90 0.88 0.93
MergeAlign 0.91 0.59 0.74 0.80 0.75 0.84
S-Coffee 0.45 0.14 0.26 0.52 0.32 0.52
  1. Highest values for each column shown in bold.