Skip to main content
Figure 2 | BMC Bioinformatics

Figure 2

From: Identification of binding sites and favorable ligand binding moieties by virtual screening and self-organizing map analysis

Figure 2

SOM analysis of docking results obtained with ADvina on HIV-RT. Top line, (a), (b) and (c): U-matrices; bottom line, (d), (e) and (f): docking score projections. Left column, (a) and (d): DUD-E decoys set (map dimensions (I,J,K) = (24,13,11)). Middle column, (b) and (e): DUD-E active molecules ((I,J,K) = (21,14,11)). Right column, (c) and (f): EGF collection ((I,J,K) = (21,15,11)). Labels (2) and (3) correspond to cavity numbers used in Figure 1. They designate the AS and BS2, respectively.

Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us