Table 5 Comparison of top ranking associations between different stratification methods
ID | chr:pos | P CAT | \(\text {P}_{\text {LR-mds13}}^{\text {[54]}}\) | \(\text {P}_{\text {{LR-pca07}}}^{\text {[55]}}\) | \(\text {P}_{\text {{MLMA}}}^{\text {[56]}}\) | P MCAT-gv |
|---|---|---|---|---|---|---|
|  |  | λ =1 . 087 | λ =1 . 027 | λ =1 . 021 | λ =0 . 998 | λ =1 . 044 |
rs13320534 | 3:46171700 | 7.35e-8 | 2.32e-7 | 5.22e-7 | 2.17e-7 | 4.63e-6 |
rs936939 | 3:45986623 | 9.85e-7 | 1.36e-6 | 2.20e-6 | 2.40e-6 | 1.55e-5 |
rs9967637 | 19:57250898 | 1.04e-6 | 6.50e-6 | 1.24e-5 | 1.96e-6 | 4.96e-5 |
rs17650960 | 15:27999442 | 1.84e-6 | 7.93e-5 | 9.67e-5 | 5.33e-5 | 3.81e-5 |
rs10902222 | 11:810882 | 1.89e-6 | 2.76e-5 | 1.14e-5 | 1.04e-5 | 4.16e-5 |
rs1992102 | 3:21280562 | 2.80e-6 | 1.55e-6 | 1.22e-6 | 2.93e-6 | 2.38e-2 |
rs2962492 | 5:39568609 | 7.54e-6 | 3.72e-6 | 4.19e-6 | 7.08e-6 | 1.08e-6 |
rs4673251 | 2:204114244 | 1.70e-5 | 6.90e-6 | 1.13e-5 | 2.03e-5 | 8.57e-2 |
rs16844699 | 3:103879674 | 4.00e-5 | 6.04e-5 | 6.04e-5 | 3.50e-4 | 1.50e-5 |
kgp9470129 | 3:141298124 | 5.30e-5 | 3.70e-5 | 2.67e-5 | 2.20e-5 | 1.34e-5 |
rs8073498 | 17:7569698 | 1.32e-4 | 1.66e-3 | 1.08e-3 | 6.90e-4 | 1.36e-5 |
rs3094078 | 6:30224970 | 3.16e-3 | 5.85e-8 | 5.00e-7 | 3.05e-2 | 1.28e-2 |