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Table 15 Classification performance using centroid free energy

From: Secondary structural entropy in RNA switch (Riboswitch) identification

Classifier

T P %

F P 1 %

F P 2 %

Sensitivity

Sig.

LCFEGCRND

65.2

30.4

15.4

66.1

CFE

LCFEGC

78.3

56.5

15.4

61

L,CFE

LCFEGCBJK

82.6

65.2

15.4

59.3

GC

  1. Classifier Performance. Actual length of sequences used. Feature CFE denotes centroid free energy as calculated by CentroidFoldâ’¸ [62]. Column Classifier denotes features used from the training set. T P % denotes percentage of true positives. F P 1 % and F P 2 % represent the percentages of antisense sequences and E. coli UTRs that are misclassified as riboswitches, respectively. Sensitivity denotes overall percentage of correctly classified sequences. Sig. denotes significant (less than 0.05 in the training set) features of the multinomial classifier.