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Table 21 B. subtilis riboswitches ranking under constant-length test

From: Secondary structural entropy in RNA switch (Riboswitch) identification

Name Overlap Rank p-Value Probability
TPP 82.9 347 0.0122 0.76
Guanine 90.1 535 0.0189 0.735
ATP 85.6 1159 0.0409 0.676
Lysine 83.5 2278 0.0804 0.612
Adenine 100 2459 0.0868 0.604
FMN 51.7 3880 0.1369 0.547
preQ1 80 4051 0.1429 0.541
Magnesium 62.3 4212 0.1486 0.536
Glycine 91.7 5200 0.1835 0.508
Tryptophan 100 6074 0.2143 0.484
SAM-I 68.8 12330 0.4351 0.356
  1. Ranking probabilities of the eleven B. subtilis riboswitches within the 157 nt non-overlaping window scan of the intergenic regions of B. subtilis under the LMFEGCRND classifier. Total of 28340 sequence segments belonging to intergenic regions longer than 150 nt were analyzed. Operon coordinates: [83]. Overlap denotes the percentage of overlap of the sequence segment with the riboswitch. Column p-Value is the ranking divided by 28340. Column Probability is the classification probability that the sequence is a riboswitch.