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Table 4 Average model quality measures of homology modeling results of 46 benchmark targets obtained by ModellerCSA using σ RF , σ Modeller , and σ native are shown

From: Sigma-RF: prediction of the variability of spatial restraints in template-based modeling by random forest

  T M max T M Emin T M avg l D D T max l D D T Emin l D D T avg
σ native 0.756 0.734 0.710 0.661 0.650 0.648
σ RF 0.730 0.722 0.707 0.636 0.630 0.626
σ Modeller 0.727 0.719 0.691 0.635 0.630 0.624
No. of improved targets 32/46 33/46 34/46 29/46 29/46 30/46