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Table 2 Comparison of the run-times (in seconds) of different denoising pipelines

From: FlowClus: efficiently filtering and denoising pyrosequenced amplicons

  FlowClus, min. filtering FlowClus, with filtering* AmpliconNoise** QIIME
Number of reads denoised 40627 34592 31868 36281
Filtering 63 64 5568 2211
Denoising clustering: 16 clustering: 8 16536 35796
trie: 3 trie: 2
  1. *Filtering options as shown in Table 1.
  2. **Denoising by the PyroNoise step only.