Figure 9From: DECODE: an integrated differential co-expression and differential expression analysis of gene expression dataThe scatterplot of differential expression (DE) and correlation between TRIM22 and every gene in (a) breast cancer state and (b) in normal state. Each point in the plot represents a gene. The x-axis in (a) and (b) represents the correlation coefficients, rN and rD, between TRIM22 and every gene in breast cancer state and normal state respectively. The y-axis represents the DE, t, of the gene. A positive t value indicates a higher gene expression in disease state in compare to normal state, and vice versa, a negative t value indicates a lower gene expression in disease state in compare to normal state. The optimal threshold for DE is drawn using red dash line. Genes found in “cellular response to type I interferon” are highlighted using triangles. Similar to Figure 8, these genes with different DC and DE values are highlighted in different colours: HDC_HDE (red); HDC_LDE (blue); LDC_HDE (green); LDC_LDE (pink).Back to article page