Skip to main content

Table 2 The strategies of parameter setting for all approaches compared in experiments

From: A density-based clustering approach for identifying overlapping protein complexes with functional preferences

Approach

Strategy

Approach

Strategy

DCAFP

Experimental Trials

PCIA

Default Setting (Inflation = 1.8, μ = 0.7)

GMFTP

Default Setting (k = 1000)

MCL

Default Setting (Inflation = 1.8)

MCODE

Default Setting (VWP = 0.2)

RNSC

N/A

IPCA

Experimental Trials

CFinder

N/A

CMC

Experimental Trials

COACH

Experimental Trials