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Figure 3 | BMC Bioinformatics

Figure 3

From: Topological characterization of neuronal arbor morphology via sequence representation: II - global alignment

Figure 3

Dendrite clusters. a. Clusters of (non-apical) dendrites are shown in two perspectives of alignment space. Each perspective highlights dendrites in three of the six clusters, with dendrites in the other three shown in gray. b. The association matrix of the clusters and seven groups defined by metadata combination of species, region, cell type, and age range. The number of dendrites in each group and cluster are shown in parentheses. Values reflect the natural log of the contingency matrix p-values, with absolute values above 3 being significant (p ≤ 0.05). Dark gray cells represent cases in which significantly fewer dendrites satisfy the cluster/group association than expected given the marginals. Positive values in colored cells represent cases in which more dendrites fall into the cell than expected. Darker colors signify that an example morphology and dendrogram is provided in c (NMO_05022, 09439, 00298, 00625, 05409, 06531, 07043, 06659) [54-61].

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