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Fig. 1 | BMC Bioinformatics

Fig. 1

From: Evaluation of variant detection software for pooled next-generation sequence data

Fig. 1

Effects of Pool Size on Program Balanced Accuracies. “Balanced accuracy” is defined as the mean of the sensitivity and 1 minus the false positive rate. No data point is reported for GATK with 16 or 32 samples because runs did not complete within a reasonable timeframe. Values are plotted for (a) ClinSeq and (b) Thousand Genomes pools containing read depth 50 % of a typical whole exome, which was 35.1x, on average, for ClinSeq samples and 21.0x, on average, for Thousand Genomes samples

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