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Fig. 1 | BMC Bioinformatics

Fig. 1

From: Evaluation of BLAST-based edge-weighting metrics used for homology inference with the Markov Clustering algorithm

Fig. 1

Pre-clustering BLAST graph for ECK database with E-value ≤ 1e-5. BLAST graph representing sequences as nodes that have been arranged into rings corresponding to the connected components. Blue edges connect sequences from the same KOG. Yellow edges connect sequences from different KOGs. The blue circles represent single-KOG clusters that have been successfully resolved using only BLAST’s E-value threshold option (1e-5 in this case)

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BMC Bioinformatics

ISSN: 1471-2105

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