From: Light-weight reference-based compression of FASTQ data
Data | BWA | Light-weight mapping model | ||
---|---|---|---|---|
Mapping time (s) | Compression ratios | Mapping time (s) | Compression ratios | |
ERR231645 | 130.30 | 0.124 | 46.60 | 0.127 |
ERR005143 | 533.72 | 0.150 | 56.21 | 0.151 |
SRR352384 | 4036.98 | 0.111 | 289.02 | 0.111 |
SRR801793 | 1907.43 | 0.174 | 79.19 | 0.176 |
SRR554369 | 449.68 | 0.179 | 105.33 | 0.182 |
ERR654984 | 282.84 | 0.146 | 69.37 | 0.140 |
ERR233152 | 209.38 | 0.120 | 82.43 | 0.126 |
SRR327342 | 2458.69 | 0.201 | 148.38 | 0.201 |
Average | 1251.13 | 0.147 | 109.57 | 0.148 |