Fig. 5
From: PredSTP: a highly accurate SVM based model to predict sequential cystine stabilized peptides
Comparison of the true positive hits detected in newNMR testset using different methods. Bar diagram of a comparison the number of true positive hits detected by testing recently deposited proteins chains solved by NMR in PDB (July, 4 2012 to March, 25 2014) using different methods. Each stack color represents a different type of fold. PredSTP detected nine ICKs, five Cyclotides and six nonknotted STPs; PSI BLAST with E-value 0.01 detected 1 ICK, five Cyclotides and five nonknotted STPs; PSI BLAST with E-value 0.1 and 0.5 detected five ICKs, five Cyclotides and seven nonknotted STPs; Knoter1D detected three ICKs and five Cyclotides