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Table 3 Comparative evaluation of SuRankCo and GAGE

From: SuRankCo: supervised ranking of contigs in de novo assemblies

 

Num

N50

Errors

N50corr

Specific Training

0.7208

-0.7857

-0.6071

-0.6071

Combined Training

0.6847

-0.6786

-0.1786

-0.8571

  1. The table shows the Spearman correlations between assembly ranks based on SuRankCo score means and GAGE metrics for R. sphaeroides assemblies. Correlations are calculated for SuRankCo ranks based on assembler specific trained classifier as well as combined trained classifier
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BMC Bioinformatics

ISSN: 1471-2105

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