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Table 4 Overlap between algorithm rankings and binding data for Yeast Cell Cycle data. The percent of probes in the top X % of rankings for each algorithm that are in the set of bindings targets that we compiled from the ChIP-chip data of Simon, et al, 2001

From: SW1PerS: Sliding windows and 1-persistence scoring; discovering periodicity in gene expression time series data

Alg 5 % 10 % 15 % 20 %
SW rank 14 24 31 35
DL rank 39 53 56 59
LS rank 9 22 35 38
JTK rank 10 19 31 40