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Table 5 Overlap between algorithm rankings and binding data for Mammal Circadian data. The percent of probes in the top X % of rankings for each algorithm that are in the set of bindings targets that we compiled from the ChIP-Seq data of Koike, et al, 2012. Note that the array for the circadian data set has multiple probes for some genes and duplicates were not removed

From: SW1PerS: Sliding windows and 1-persistence scoring; discovering periodicity in gene expression time series data

Alg 5 % 10 % 15 % 20 %
SW rank 32 50 63 74
DL rank 41 54 69 70
LS rank 37 53 65 71
JTK rank 35 55 70 78