Table 3 Copies of the 233-bp-long centromeric novel repeat: chr10:38932814–38933047. There are 73 copies of this novel repeat found throughout the human genome. The locations of 61 of these copies are known, whereas 12 of them are mapped to random segments of the genome. Out of the 61, 41 (67.0 %) copies are located in or within 1 mbp from the centromeres of several human chromosomes
From: Red: an intelligent, rapid, accurate tool for detecting repeats de-novo on the genomic scale
BLAST Hist | Identity (%) | Centromeric? | BLAST Hist | Identity (%) | Centromeric? |
|---|---|---|---|---|---|
chr1:125097011–125096780 | 94.9 | yes | chr9:65753438–65753671 | 94.9 | no |
chr1:125143875–125144108 | 92.7 | yes | chr10:42109674–42109443 | 95.3 | yesa |
chr1:143279916–143279685 | 92.7 | no | chr10:42120842–42120611 | 94.9 | yesa |
chr1:143535471–143535704 | 93.6 | no | chr15:19934467–19934700 | 94.9 | yes |
chr2:90335400–90335172 | 94.4 | yesa | chr16:32106608–32106841 | 94.4 | no |
chr2:91468090–91468320 | 94.8 | yes | chr16:32821244–32821013 | 94.4 | no |
chr2:91800041–91800275 | 94.4 | yes | chr16:33049905–33050138 | 94.4 | no |
chr2:92052731–92052499 | 94.4 | yes | chr16:34041061–34041294 | 95.3 | yesa |
chr2:92076458–92076691 | 95.3 | yes | chr16:34460177–34459946 | 91.9 | yesa |
chr2:94282644–94282411 | 94.5 | yes | chr16:34497844–34497619 | 94.3 | yesa |
chr2:132008526–132008295 | 94.9 | no | chr16:34510019–34509788 | 94.0 | yesa |
chr2:132047806–132047581 | 92.7 | no | chr16:34653787–34654020 | 93.1 | yesa |
chr7:53130967–53130730 | 91.2 | no | chr16:34692352–34692578 | 93.4 | yesa |
chr7:57878379–57878148 | 94.4 | yesa | chr16:34792862–34793095 | 93.1 | yesa |
chr7:58101480–58101713 | 94.4 | yes | chr16:34838562–34838795 | 94.4 | yesa |
chr7:60906762–60906995 | 94.9 | yes | chr16:34850733–34850960 | 94.3 | yesa |
chr7:60982800–60983033 | 94.9 | yes | chr16:34888413–34888646 | 91.9 | yesa |
chr7:61076250–61076019 | 94.9 | yes | chr16:34943100–34943333 | 94.9 | yesa |
chr7:61583132–61582901 | 94.9 | yes | chr16:36163632–36163865 | 93.1 | yes |
chr7:62318164–62317933 | 94.4 | yes | chr16:36222879–36223112 | 91.9 | yes |
chr7:62398128–62398361 | 94.4 | yes | chr16:46425718–46425487 | 94.4 | no |
chr7:62434242–62434475 | 94.9 | yes | chr16:46436413–46436188 | 92.3 | no |
chr7:65114062–65114290 | 92.3 | no | chr17:26756876–26757109 | 95.7 | yes |
chr7:65519041–65518815 | 92.3 | no | chr17:26953504–26953737 | 97.4 | yes |
chr7:65581931–65581705 | 92.3 | no | chr18:15163745–15163514 | 95.7 | yes |
chr9:40660714–40660483 | 94.9 | no | chr18:15207260–15207029 | 94.4 | yes |
chr9:43290928–43290698 | 95.3 | yes | chr21:8585703 -8585935 | 94.0 | no |
chr9:43313883–43314115 | 95.3 | yes | chr21:10618400–10618633 | 94.4 | yes |
chr9:63460122–63459891 | 94.9 | no | chr22:10562609–10562841 | 94.0 | no |
chr9:64784259–64784028 | 94.9 | no | chr22:16255856–16256089 | 95.7 | yes |
chr9:65268071–65267840 | 94.9 | no |  |  |  |