From: Comparison of phosphorylation patterns across eukaryotes by discriminative N-gram analysis
Training set | Number of phosphopeptides | Number of n-grams | References | Kingdom | Phylum |
---|---|---|---|---|---|
Arabidopsis thaliana | 2903 and 4270 | 349724 and 527397 | Plantae | ||
Homo sapiens | 1972 and 4075 | 200661 and 454563 | Animalia | Chordata | |
Drosophila melanogaster | 6363 and 6362 | 671933 and 596922 | Animalia | Arthropoda | |
Saccharomyces cerevisiae | 6343 and 1178 | 712345 and 116095 | Fungi | Ascomycota | |
Plasmodium falciparum | 744 and 1048 | 93799 and 137899 | Chromalveolata | Apicomplexa | |
Oryza sativa | 447 | 50007 | [58] | Plantae | |
Mus musculus | 7372 | 811443 | Animalia | Chordata | |
Caenorhabditis elegans | 4003 | 436055 | [61] | Animalia | Nematoda |
Schizosaccharomyces pombe | 1362 | 155639 | [62] | Fungi | Ascomycota |
Toxoplasma gondii | 1388 | 172714 | [56] | Chromalveolata | Apicomplexa |