Table 1 The best hits of the estimated (BAMBI2b) vs true (RegPrecise) LexA motifs in SwissRegulon database
From: Reconstruction of novel transcription factor regulons through inference of their binding sites
| Â | BAMBI2b | RegPrecise |
|---|---|---|
| Â | motif | motif |
Target ID | LexA_20-6 | LexA_20-6 |
Optimal offset | 2 | 2 |
p-value | 2.05557e-11 | 2.97639e-09 |
e-value | 1.99391e-09 | 2.88709e-07 |
q-value | 3.96654e-09 | 5.74338e-07 |
Overlap | 18 | 18 |
Query | TACTGTATATATAAACAGTA | TACTGTATATATATACAGTA |
consensus | Â | Â |
Target | TATACTGTATATAAAAACAG | TATACTGTATATAAAAACAG |
consensus | Â | Â |
Orientation | + | + |