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Table 6 The best hits of the estimated (BAMBI2b) vs true (RegPrecise) Fur motifs in SwissRegulon database

From: Reconstruction of novel transcription factor regulons through inference of their binding sites

 

BAMBI2b

RegPrecise

 

motif

motif

Target ID

Fur_21-4

Fur_21-4

Optimal offset

4

1

p-value

3.01028e-07

2.00946e-10

e-value

2.91997e-05

1.94918e-08

q-value

5.77853e-05

3.00056e-08

Overlap

17

19

Query

AATGATTATCATTATCATT

GATAATGATTATCATTATC

consensus

  

Target

TGATAATGATAATAATTATCA

TGATAATGATTATCATTATCA

consensus

  

Orientation

-

+