Table 8 The best hits of the estimated (BAMBI2b) vs true (RegulonDB) Fis motifs in SwissRegulon database
From: Reconstruction of novel transcription factor regulons through inference of their binding sites
| Â | BAMBI2b motif | RegulonDB motif |
|---|---|---|
Target ID | Fis_26-32 | Fis_26-32 |
Optimal offset | 7 | 3 |
p-value | 6.29038e-06 | 3.21289e-08 |
e-value | 0.000610167 | 3.1165e-06 |
q-value | 0.00121382 | 6.16615e-06 |
Overlap | 10 | 15 |
Query consensus | CGCTGAAAAA | GCTTATTTTTTAAGC |
Target consensus | GTTCTGTTGCTGAAAAAATAACCAAA | TTTGGCTATTTTTTCAGCAACAGAAC |
Orientation | + | - |