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Fig. 2 | BMC Bioinformatics

Fig. 2

From: InteMAP: Integrated metagenomic assembly pipeline for NGS short reads

Fig. 2

Genes covered by different assemblies. a The number of genes uncovered by any assemblies, covered by more than one assemblies and covered exclusively by only one assembly of the five assemblers (ABySS (k-mer size 23), CABOG, IDBA-UD, MetaVelvet (k-mer size 23), SOAPdenovo (k-mer size 23)), for the species with low coverage (<18×) are stacked. The lateral axis shows the coverage of each species. Only partial species with coverage lower than 18× are drawn. b The stacked bar plot draws the distribution of the total genes on species with low coverage (<18×) covered by IDBA-UD assembly and CABOG assembly. The blue part and the cyan part represent genes covered exclusively by CABOG and IDBA-UD, and the magenta part represents the genes shared by CABOG and IDBA-UD

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