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Fig. 6 | BMC Bioinformatics

Fig. 6

From: Reference-free compression of high throughput sequencing data with a probabilistic de Bruijn graph

Fig. 6

Compression / accuracy trade-off for quality compression. Impact of lossy compression methods of quality scores on SNP calling, for a human chromosome 20 (HG00096 individual, SRR062634) compared to a gold standard. Each line represents the F-score/compressed size trade-off for a method, the higher the line, the better. The dashed line represents the F-score obtained by the original fastq file and by lossless compression methods

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