Table 3 Results of dRW, dRW-Corpus, dRW-Disjoint, dRW-E in predicting the missing BP functions of Yeast proteins, \(|\mathcal {T}|=2979\) with m=3
From: Predicting protein function via downward random walks on a gene ontology
Metric | dRW | dRW-Corpus | dRW-Disjoint | dRW-E |
|---|---|---|---|---|
MacroF1 | 83.29 ± 0.13 | 79.77 ± 0.09 | 83.19 ± 0.09 | 83.17 ± 0.07 |
AvgROC | 99.59 ± 0.02 | 93.61 ± 0.07 | 99.57 ± 0.01 | 99.57 ± 0.00 |
1-RankLoss | 99.17 ± 0.03 | 93.87 ± 0.05 | 99.11 ± 0.02 | 98.87 ± 0.01 |
Fmax | 93.92 ± 0.01 | 93.67 ± 0.00 | 93.90 ± 0.01 | 93.89 ± 0.01 |
RAccuracy | 36.08 ± 0.24 | 15.58 ± 0.31 | 33.65 ± 0.27 | 32.67 ± 0.50 |
Coverage ↓ | 234.61 ± 4.92 | 1843.95 ± 18.70 | 242.53 ± 1.44 | 255.14 ± 5.49 |