From: SMRT sequencing only de novo assembly of the sugar beet (Beta vulgaris) chloroplast genome
Position cp_2320 | Position KJ8018 | Type | cp_2320 correct with respect to FES | Influenced annotation | Located in |
---|---|---|---|---|---|
1355 | 1355 | Insertion in cp_2320 (61Â bp) | Yes | - | LSCR |
1426 | 1361 | Substitution (1Â bp) | Yes | - | LSCR |
1430 | 1365 | Insertion in cp_2320 (1Â bp) | Yes | - | LSCR |
12,633 | 12,567 | Insertion in cp_2320 (1Â bp) | Yes | - | LSCR |
29,255 | 29,188 | Deletion in cp_2320 (5Â bp) | Yes | - | LSCR |
35,514 | 35,452 | Deletion in cp_2320 (2Â bp) | Yes | - | LSCR |
45,756 | 45,696 | Substitution (1Â bp) | Yes | - | LSCR |
45,773 | 45,713 | Deletion in cp_2320 (1Â bp) | Yes | - | LSCR |
45,776 | 45,717 | Deletion in cp_2320 (1Â bp) | Yes | - | LSCR |
45,780 | 45,722 | Deletion in cp_2320 (1Â bp) | Yes | - | LSCR |
51,980 | 51,923 | Deletion in cp_2320 (4Â bp) | Yes | - | LSCR |
56,686 | 56,633 | Deletion in cp_2320 (1Â bp) | Yes | accD | LSCR |
60,118 | 60,066 | Insertion in cp_2320 (2Â bp) | Yes | cemA | LSCR |
63,266 | 63,212 | Substitution (1Â bp) | Yes | psbL | LSCR |
84,321 | 84,267 | Insertion in cp_2320 (1Â bp) | Yes | - | IR 1 |
96,607 | 96,552 | Deletion in cp_2320 (6Â bp) | Yes | - | IR 1 |
100,122 | 100,073 | Deletion in cp_2320 (1Â bp) | No | - | IR 1 |
111,817 | 111,769 | Substitution 6Â bp (1Â bp) | Yes | - | SSCR |
111,858 | 111,810 | Insertion in cp_2320 (45Â bp) | Yes | ccsA | SSCR |
114,513 | 114,420 | Substitution (1Â bp) | Yes | ndhD | SSCR |
117,806 | 117,713 | Deletion in cp_2320 (1Â bp) | Yes | ndhAa | SSCR |
136,237 | 136,145 | Deletion in cp_2320 (6Â bp) | Yes | - | IR 2 |
148,514 | 148,428 | Insertion in cp_2320 (1Â bp) | Yes | - | IR 2 |