BMC Bioinformatics

Table 2 Datasources used in this study and their characteristics

From: NetBenchmark: a bioconductor package for reproducible benchmarks of gene regulatory network inference

Datasource	Name	Topology	Experiments	Genes	Edges
R o g e r s ₁₀₀₀	R1	Power-law	1000	1000	1350
		tail topology
S y n T R e N ₃₀₀	S1	E. coli	800	300	468
S y n T R e N ₁₀₀₀	S2	E. coli	1000	1000	4695
G N W ₁₅₆₅	G1	E. coli	1565	1565	7264
G N W ₂₀₀₀	G2	Yeast	2000	2000	10392

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ISSN: 1471-2105

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