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Fig. 3 | BMC Bioinformatics

Fig. 3

From: htsint: a Python library for sequencing pipelines that combines data through gene set generation

Fig. 3

Gene set visualization. htsint was used to visualize a gene set that is produced in the tutorial section of the documentation. Gene Ontology terms are shown as square nodes with the rank according to the number of connections indicated by the label. Additionally, the full name for each term is provided in the legend. Terms are connected by edges representing their semantic distance, which is scaled and shown only for a percentile cutoff (default is 25th) for visualization purposes. Genes are represented as circular nodes with NCBI gene symbols overlaid as labels. The gene nodes are connected through annotations and the species from which the gene belongs to is indicated by the color and specified in the legend

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