Phylodynamic reconstruction of the spatiotemporal transmission and demographic history of coxsackievirus B2

BMC Bioinformatics

Table 1 Primer sets used for amplification and sequencing of Coxsackievirus B2

Gene	Primer^a	Sequence	Position^b	Reference
VP3	2400F	GCTTTGTGTCTGCMTGYAATGA	2372-2393	CDC-TW^c
VP1	222R	CICCIGGIGGIAYRWACAT	2909-2891	[20]
VP1	292F	MIGCIGYIGARACNGG	2550-2565	[20]
2A	011R	GCICCIGAYTGITGICCRAA	3327-3308	[20]
3D^pol	PY-03F	GTYACMTATGTGAARGATG	6383-6398	This study
3D^pol	PY-04R	CTTCATTGGCATTACTGGATG	7104-7085	This study

^aF: Forward primer, R: reverse primer
^bNumbering system used for the Coxsackievirus B2 strain (Accession No. AF085363)
^cPrimer designed by the Centers for Disease Control, Taiwan

ISSN: 1471-2105