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Fig. 8 | BMC Bioinformatics

Fig. 8

From: Improving RNA-Seq expression estimation by modeling isoform- and exon-specific read sequencing rate

Fig. 8

ROC curves of DE analysis for selected RCR-validated multi-isoform genes in MAQC dataset. NLDMseq is combined with PPLR to propagate measurement uncertainty in DE analysis. Cufflinks, RSEM and MMSEQ are combined with embedded DE analysis methods, Cuffdiff, EBSeq and mmdiff, respectively. The AUCs for NLDMseq, Cufflinks, RSEM and MMSEQ are 0.9659, 0.8793, 0.8275 and 0.9625, respectively

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