Alignment tool | # of times generating best models |
---|
TBM & FM domains | TBM domains | FM domains |
---|
HHSearch / HHSuite | 49 | 41 | 8 |
RaptorX | 13 | 10 | 3 |
MUSTER | 7 | 5 | 2 |
HHblits | 7 | 6 | 1 |
COMPASS | 6 | 5 | 1 |
PSI-BLAST | 2 | 2 | Â |
BLAST | 1 | 1 | Â |
HMMer | 1 | 1 | Â |
PRC | 1 | 1 | Â |
FFAS | 1 | 1 | Â |
- The numbers represent the number of times that each of the independent pairwise alignment tools excluding the alignment combination methods generated alignments leading to the creation of the best models for 75 TBM and 30 FM CASP11 domains. It is worth noting that the results of several versions of HHSearch used in the MULTICOM server are combined together