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Table 6 Computation time per image for different datasets and image sizes

From: CytoSpectre: a tool for spectral analysis of oriented structures on cellular and subcellular levels

Image size (pixels)

Cell cluster dataset

Fibril dataset

Validation set 1

Validation set 2

Validation set 3

500 × 500

1.96 ± 0.46

1.93 ± 0.26

2.17 ± 0.32

2.18 ± 0.44

2.40 ± 0.39

1000 × 1000

1.91 ± 0.28

2.00 ± 0.30

2.26 ± 0.52

2.10 ± 0.38

2.62 ± 0.54

2000 × 2000

2.04 ± 0.18

2.10 ± 0.37

2.36 ± 0.34

2.17 ± 0.32

2.59 ± 0.61

3000 × 3000

2.24 ± 0.49

2.30 ± 0.32

2.40 ± 0.29

2.52 ± 0.42

2.62 ± 0.49

4000 × 4000

6.79 ± 0.73

7.40 ± 1.52

8.65 ± 1.52

7.84 ± 1.10

9.61 ± 2.06

5000 × 5000

7.05 ± 0.75

7.87 ± 1.85

8.36 ± 1.23

8.26 ± 1.63

9.77 ± 2.05

  1. Computation time (mean ± standard deviation) in seconds required for analyzing a single image from each dataset at different image sizes. The analysis was performed using a laptop PC equipped with an Intel Core™ i5 processor