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Fig. 2 | BMC Bioinformatics

Fig. 2

From: Peak shape clustering reveals biological insights

Fig. 2

A schematic overview of the analysis pipeline proposed. After a ChIP-seq pre-processing, that involves the calculation of the coverage function for each peak found by the peak caller, multivariate clustering on five indices of intensity and shape is employed to find groups of similar peaks. Afterwards, the characterization of these clusters is studied by using GO analysis and motif analysis. Moreover, clusters are related with the presence of other proteins and with gene expression

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