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Fig. 2 | BMC Bioinformatics

Fig. 2

From: A large scale prediction of bacteriocin gene blocks suggests a wide functional spectrum for bacteriocins

Fig. 2

Determining the threshold for similarity-based search of toxin genes. Toxin gene candidates were derived as described in the text. To determine an adequate threshold for inferring homology, we examined the distribution of HMMER scores for homologs for predicted toxin genes (red) and BAGEL-derived toxin genes (blue). BAGEL toxin gene scores were used to set a minimum threshold of acceptance for HMMER scores for predicted genes

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BMC Bioinformatics

ISSN: 1471-2105

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