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Table 4 Mapper and mapping stringency interaction. L o g 10-transformed means for the interaction between mapper and mapping stringency

From: An investigation of causes of false positive single nucleotide polymorphisms using simulated reads from a small eukaryote genome

 

Stringency

Relaxed

Strict

Mapper

   

Bowtie2

 

2.7780

2.3343

BWA-SW

 

2.5099

0.6807

Sed = 0.00365

   
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BMC Bioinformatics

ISSN: 1471-2105

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