Table 1 Quality score recalibration model trained on FASTQ/1 GAIIx data
From: QQ-SNV: single nucleotide variant detection at low frequency by comparing the quality quantiles
Parameter | Coefficient | Significance (P-value) |
|---|---|---|
Intercept | 0.84 (α 0) | 2.27e-5 |
QUAL | −0.16 (α 1) | <2e-16 |
RELPOS | −0.89 (α 2) | <2e-16 |