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Fig. 5 | BMC Bioinformatics

Fig. 5

From: An affinity-structure database of helix-turn-helix: DNA complexes with a universal coordinate system

Fig. 5

Visualizing distances between recognition helices as a graph. a Nodes (pink circles) represent individual recognition helices. Edges (blue lines) are formed between two nodes if their respective recognition helices have a sequence distance of zero. Disconnected nodes (pink circles with no edges) are unique HTH domains. b Some subgraphs are not fully connected, i.e. not every node is connected to every other node. In such cases the central-most node with the highest resolution is chosen

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