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Table 4 Distribution of DNA binding site data sources

From: An affinity-structure database of helix-turn-helix: DNA complexes with a universal coordinate system

Data source Fraction of DNA binding sites
TRANSFAC 39.39 %
PRODORIC 22.41 %
RedFly/FlyReg 18.22 %
Fly SELEX 17.79 %
Original literature 14.13 %
JASPAR 12.04 %
HTP SELEX 4.19 %
RegTransBase 2.90 %
DBTBS 2.19 %
RegulonDB 1.05 %
DPInteract 0.71 %
  1. Percentages do not add up to 100 because some sites occur in multiple databases
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