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Table 17 Computational time (in seconds) / memory usage (in megabyte) of the individual tools

From: PC-TraFF: identification of potentially collaborating transcription factors using pointwise mutual information

 

Genome-wide analysis

Breast cancer analysis

PC-TraFF

4158.4 s / 3229 Mb

4.4 s / 581 Mb

CPModule

2213.0 s / 721.6 Mb

5.9 s / 7.8 Mb

CrmMiner

34409.6 s / 526 Mb

857.4 s / 90 Mb

MatrixCatch

627.2 s / 70.7 Mb

16.9 s / 46.2 Mb