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Table 3 Performance comparison between PC-TraFF20,PC-TraFF50,PC-TraFF100, MatrixCatch (MC), CPModule (CPM), and CrmMiner (CrmM)

From: PC-TraFF: identification of potentially collaborating transcription factors using pointwise mutual information

 

Sensitivity

Specificity

MCC

PC-TraFF20

2.3 %

99.5 %

0.088

PC-TraFF50

3.1 %

99.3 %

0.10

PC-TraFF100

3.2 %

99.3 %

0.102

MC

0.5 %

99.9 %

0.053

CPM

0.5 %

100 %

0.06

CrmM

0.6 %

99.6 %

0.025